Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pknox1O70477 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pknox1O70477 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pknox1O70477 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.56■□□□□ 0.08
Pknox1O70477 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.56■□□□□ 0.08
Pknox1O70477 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pknox1O70477 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pknox1O70477 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pknox1O70477 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pknox1O70477 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pknox1O70477 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pknox1O70477 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pknox1O70477 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.55■□□□□ 0.08
Pknox1O70477 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.55■□□□□ 0.08
Pknox1O70477 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.55■□□□□ 0.08
Pknox1O70477 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.55■□□□□ 0.08
Pknox1O70477 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pknox1O70477 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pknox1O70477 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.54■□□□□ 0.08
Pknox1O70477 Gm17808-201ENSMUST00000200859 894 ntBASIC15.54■□□□□ 0.08
Pknox1O70477 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.54■□□□□ 0.08
Pknox1O70477 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Pknox1O70477 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pknox1O70477 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.54■□□□□ 0.08
Pknox1O70477 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pknox1O70477 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.54■□□□□ 0.08
Pknox1O70477 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pknox1O70477 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pknox1O70477 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pknox1O70477 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.53■□□□□ 0.08
Pknox1O70477 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.53■□□□□ 0.08
Pknox1O70477 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.53■□□□□ 0.08
Pknox1O70477 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.53■□□□□ 0.08
Pknox1O70477 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Pknox1O70477 Gm29518-201ENSMUST00000190858 372 ntBASIC15.53■□□□□ 0.08
Pknox1O70477 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pknox1O70477 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pknox1O70477 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.53■□□□□ 0.08
Pknox1O70477 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pknox1O70477 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms