Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.86□□□□□ -0.67
Sigmar1O55242 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.86□□□□□ -0.67
Sigmar1O55242 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sigmar1O55242 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Sigmar1O55242 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.85□□□□□ -0.67
Sigmar1O55242 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC10.85□□□□□ -0.67
Sigmar1O55242 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sigmar1O55242 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Sigmar1O55242 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.84□□□□□ -0.67
Sigmar1O55242 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Gm15546-201ENSMUST00000122095 826 ntBASIC10.84□□□□□ -0.67
Sigmar1O55242 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC10.84□□□□□ -0.67
Sigmar1O55242 Gm43060-201ENSMUST00000200621 289 ntBASIC10.84□□□□□ -0.67
Sigmar1O55242 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.84□□□□□ -0.67
Sigmar1O55242 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sigmar1O55242 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.67
Sigmar1O55242 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sigmar1O55242 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sigmar1O55242 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms