Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Abca4O35600 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Gm15236-201ENSMUST00000117309 379 ntBASIC14.58□□□□□ -0.08
Abca4O35600 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.58□□□□□ -0.08
Abca4O35600 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Abca4O35600 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Abca4O35600 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.57□□□□□ -0.08
Abca4O35600 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.57□□□□□ -0.08
Abca4O35600 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.57□□□□□ -0.08
Abca4O35600 Gm13392-201ENSMUST00000117708 150 ntBASIC14.57□□□□□ -0.08
Abca4O35600 Gm12176-201ENSMUST00000121420 875 ntBASIC14.57□□□□□ -0.08
Abca4O35600 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.57□□□□□ -0.08
Abca4O35600 Gm17420-201ENSMUST00000164753 153 ntBASIC14.57□□□□□ -0.08
Abca4O35600 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Abca4O35600 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.57□□□□□ -0.08
Abca4O35600 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Abca4O35600 Gm8062-201ENSMUST00000139696 444 ntBASIC14.57□□□□□ -0.08
Abca4O35600 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Abca4O35600 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.57□□□□□ -0.08
Abca4O35600 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.57□□□□□ -0.08
Abca4O35600 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.57□□□□□ -0.08
Abca4O35600 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Abca4O35600 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Abca4O35600 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.56□□□□□ -0.08
Abca4O35600 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Abca4O35600 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.56□□□□□ -0.08
Abca4O35600 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Abca4O35600 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.55□□□□□ -0.08
Abca4O35600 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Abca4O35600 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.55□□□□□ -0.08
Abca4O35600 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.55□□□□□ -0.08
Abca4O35600 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Abca4O35600 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Abca4O35600 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.55□□□□□ -0.08
Abca4O35600 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Abca4O35600 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.55□□□□□ -0.08
Abca4O35600 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Abca4O35600 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Abca4O35600 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Gm13226-201ENSMUST00000117838 404 ntBASIC14.54□□□□□ -0.08
Abca4O35600 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.54□□□□□ -0.08
Abca4O35600 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.54□□□□□ -0.08
Abca4O35600 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Abca4O35600 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms