Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Mir5122-201ENSMUST00000175004 89 ntBASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Gm29257-201ENSMUST00000186115 639 ntBASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Gm21814-202ENSMUST00000203277 873 ntBASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Gm10542F6XDR3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Gm10542F6XDR3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.89□□□□□ -0.67
Gm10542F6XDR3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 BC037039-201ENSMUST00000192003 2205 ntBASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Gm2274-201ENSMUST00000184539 609 ntBASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Gm10542F6XDR3 Gm5417-201ENSMUST00000079706 384 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms