Protein–RNA interactions for Protein: E9QA15

Cald1, Caldesmon 1, mousemouse

Known RBP Predictions only

Length 768 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cald1E9QA15 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cald1E9QA15 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cald1E9QA15 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cald1E9QA15 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cald1E9QA15 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cald1E9QA15 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cald1E9QA15 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cald1E9QA15 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cald1E9QA15 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cald1E9QA15 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.65■□□□□ 0.9
Cald1E9QA15 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Gm8318-201ENSMUST00000182954 872 ntBASIC20.65■□□□□ 0.9
Cald1E9QA15 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cald1E9QA15 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cald1E9QA15 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cald1E9QA15 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cald1E9QA15 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Cald1E9QA15 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Cald1E9QA15 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Cald1E9QA15 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cald1E9QA15 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Cald1E9QA15 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.64■□□□□ 0.89
Cald1E9QA15 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cald1E9QA15 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.64■□□□□ 0.89
Cald1E9QA15 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Cald1E9QA15 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cald1E9QA15 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Gm12260-201ENSMUST00000122447 411 ntBASIC20.63■□□□□ 0.89
Cald1E9QA15 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.63■□□□□ 0.89
Cald1E9QA15 Gm7787-201ENSMUST00000216858 688 ntBASIC20.63■□□□□ 0.89
Cald1E9QA15 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cald1E9QA15 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Gm14494-201ENSMUST00000118786 435 ntBASIC20.62■□□□□ 0.89
Cald1E9QA15 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Cald1E9QA15 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cald1E9QA15 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Cald1E9QA15 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Cald1E9QA15 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.61■□□□□ 0.89
Cald1E9QA15 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.61■□□□□ 0.89
Cald1E9QA15 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.61■□□□□ 0.89
Cald1E9QA15 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Cald1E9QA15 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.61■□□□□ 0.89
Cald1E9QA15 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cald1E9QA15 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms