Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav3n-3A0A0G2JEM0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms