Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trdv1A0A075B657 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trdv1A0A075B657 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Mir6404-201ENSMUST00000183699 94 ntBASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trdv1A0A075B657 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trdv1A0A075B657 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms