Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5-4A0A075B652 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-4A0A075B652 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav5-4A0A075B652 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5-4A0A075B652 App-207ENSMUST00000227737 2827 ntBASIC13.12□□□□□ -0.31
Trav5-4A0A075B652 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5-4A0A075B652 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Sybu-209ENSMUST00000228639 4113 ntBASIC13.11□□□□□ -0.31
Trav5-4A0A075B652 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav5-4A0A075B652 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Gm6345-202ENSMUST00000180900 204 ntBASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav5-4A0A075B652 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms