Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mir1668-201ENSMUST00000184114 107 ntBASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-2-dv6-2A0A075B650 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms