Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4-2A0A075B638 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Gm37856-201ENSMUST00000191634 999 ntBASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-2A0A075B638 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Gm27463-201ENSMUST00000183569 57 ntBASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-2A0A075B638 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-2A0A075B638 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Trav4-2A0A075B638 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-2A0A075B638 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-2A0A075B638 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-2A0A075B638 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav4-2A0A075B638 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms