Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav5-1A0A075B5Z7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm5682-201ENSMUST00000173402 505 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Psmb5-202ENSMUST00000227257 622 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.41□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav5-1A0A075B5Z7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav5-1A0A075B5Z7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-1A0A075B5Z7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms