Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn5aQ9JJV9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Scn5aQ9JJV9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Scn5aQ9JJV9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Gm13223-201ENSMUST00000118609 747 ntBASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Scn5aQ9JJV9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Scn5aQ9JJV9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Scn5aQ9JJV9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms