Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Rrp8Q9DB85 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rrp8Q9DB85 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rrp8Q9DB85 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rrp8Q9DB85 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Gm13597-201ENSMUST00000121239 375 ntBASIC15.3■□□□□ 0.04
Rrp8Q9DB85 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Mir6956-201ENSMUST00000183598 62 ntBASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rrp8Q9DB85 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rrp8Q9DB85 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rrp8Q9DB85 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp8Q9DB85 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp8Q9DB85 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rrp8Q9DB85 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rrp8Q9DB85 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms