Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Mir6404-201ENSMUST00000183699 94 ntBASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chmp5Q9D7S9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chmp5Q9D7S9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Gm6257-201ENSMUST00000163864 910 ntBASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Chmp5Q9D7S9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp5Q9D7S9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp5Q9D7S9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp5Q9D7S9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Gm43799-201ENSMUST00000201845 579 ntBASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp5Q9D7S9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp5Q9D7S9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms