Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf111Q99ML9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf111Q99ML9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.21■□□□□ 0.03
Rnf111Q99ML9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf111Q99ML9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf111Q99ML9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf111Q99ML9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf111Q99ML9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.2■□□□□ 0.02
Rnf111Q99ML9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf111Q99ML9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms