Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Gm8097-201ENSMUST00000117903 829 ntBASIC18.07■□□□□ 0.48
Smc1bQ920F6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.07■□□□□ 0.48
Smc1bQ920F6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc1bQ920F6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Gm7222-201ENSMUST00000117512 906 ntBASIC18.06■□□□□ 0.48
Smc1bQ920F6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Gm11780-201ENSMUST00000136880 516 ntBASIC18.06■□□□□ 0.48
Smc1bQ920F6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smc1bQ920F6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc1bQ920F6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.04■□□□□ 0.48
Smc1bQ920F6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Mir3113-201ENSMUST00000175478 76 ntBASIC18.04■□□□□ 0.48
Smc1bQ920F6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc1bQ920F6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc1bQ920F6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.03■□□□□ 0.48
Smc1bQ920F6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Gm4459-201ENSMUST00000118750 468 ntBASIC18.03■□□□□ 0.48
Smc1bQ920F6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc1bQ920F6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms