Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4aQ8VEJ9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 App-207ENSMUST00000227737 2827 ntBASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Olfr129-201ENSMUST00000122318 993 ntBASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Gm11452-201ENSMUST00000122376 690 ntBASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Gm18206-201ENSMUST00000207027 926 ntBASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4aQ8VEJ9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4aQ8VEJ9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps4aQ8VEJ9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms