Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tsen54Q8C2A2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Mir7071-201ENSMUST00000184847 69 ntBASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Gm9731-201ENSMUST00000209480 747 ntBASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tsen54Q8C2A2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tsen54Q8C2A2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tsen54Q8C2A2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tsen54Q8C2A2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Gm11539-201ENSMUST00000119837 557 ntBASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Gm13436-201ENSMUST00000120418 567 ntBASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Gm43799-201ENSMUST00000201845 579 ntBASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.14□□□□□ -0.31
Tsen54Q8C2A2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gm13559-201ENSMUST00000120476 863 ntBASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gm17661-201ENSMUST00000170317 270 ntBASIC13.13□□□□□ -0.31
Tsen54Q8C2A2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms