Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim4Q8C1Q6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Gm9987-201ENSMUST00000069768 567 ntBASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim4Q8C1Q6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Smim4Q8C1Q6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm6257-201ENSMUST00000163864 910 ntBASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim4Q8C1Q6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim4Q8C1Q6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms