Protein–RNA interactions for Protein: Q8BYR1

Lcmt2, tRNA wybutosine-synthesizing protein 4, mousemouse

Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt2Q8BYR1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lcmt2Q8BYR1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lcmt2Q8BYR1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt2Q8BYR1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt2Q8BYR1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt2Q8BYR1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lcmt2Q8BYR1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms