Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc40Q8BI79 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc40Q8BI79 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc40Q8BI79 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc40Q8BI79 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ccdc40Q8BI79 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms