Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Gm8410-201ENSMUST00000117225 605 ntBASIC14.59□□□□□ -0.07
VcanQ62059 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.59□□□□□ -0.07
VcanQ62059 Gm6888-201ENSMUST00000221983 706 ntBASIC14.59□□□□□ -0.07
VcanQ62059 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VcanQ62059 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VcanQ62059 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VcanQ62059 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VcanQ62059 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.58□□□□□ -0.07
VcanQ62059 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VcanQ62059 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.58□□□□□ -0.07
VcanQ62059 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
VcanQ62059 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
VcanQ62059 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VcanQ62059 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.58□□□□□ -0.08
VcanQ62059 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.58□□□□□ -0.08
VcanQ62059 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.58□□□□□ -0.08
VcanQ62059 Gm38241-201ENSMUST00000192641 898 ntBASIC14.58□□□□□ -0.08
VcanQ62059 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
VcanQ62059 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VcanQ62059 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
VcanQ62059 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.57□□□□□ -0.08
VcanQ62059 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.57□□□□□ -0.08
VcanQ62059 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.57□□□□□ -0.08
VcanQ62059 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Gm15198-201ENSMUST00000117283 177 ntBASIC14.57□□□□□ -0.08
VcanQ62059 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
VcanQ62059 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VcanQ62059 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Gm14042-201ENSMUST00000120139 833 ntBASIC14.56□□□□□ -0.08
VcanQ62059 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.56□□□□□ -0.08
VcanQ62059 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Gm43179-201ENSMUST00000198797 275 ntBASIC14.56□□□□□ -0.08
VcanQ62059 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
VcanQ62059 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.56□□□□□ -0.08
VcanQ62059 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.56□□□□□ -0.08
VcanQ62059 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VcanQ62059 Gm7775-201ENSMUST00000218871 853 ntBASIC14.56□□□□□ -0.08
VcanQ62059 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VcanQ62059 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.56□□□□□ -0.08
VcanQ62059 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.55□□□□□ -0.08
VcanQ62059 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VcanQ62059 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms