Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ecm1Q61508 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ecm1Q61508 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ecm1Q61508 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ecm1Q61508 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Mir449b-201ENSMUST00000104833 80 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm10499-201ENSMUST00000174094 934 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm20949-201ENSMUST00000206478 952 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Gm18057-201ENSMUST00000208220 503 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.27■□□□□ 0.36
Ecm1Q61508 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.27■□□□□ 0.36
Ecm1Q61508 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ecm1Q61508 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ecm1Q61508 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.27■□□□□ 0.36
Ecm1Q61508 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ecm1Q61508 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ecm1Q61508 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.26■□□□□ 0.35
Ecm1Q61508 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.26■□□□□ 0.35
Ecm1Q61508 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ecm1Q61508 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.26■□□□□ 0.35
Ecm1Q61508 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.26■□□□□ 0.35
Ecm1Q61508 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ecm1Q61508 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ecm1Q61508 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ecm1Q61508 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Gm27321-201ENSMUST00000185021 205 ntBASIC17.25■□□□□ 0.35
Ecm1Q61508 Mir7023-201ENSMUST00000185093 64 ntBASIC17.25■□□□□ 0.35
Ecm1Q61508 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.25■□□□□ 0.35
Ecm1Q61508 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.25■□□□□ 0.35
Ecm1Q61508 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Ecm1Q61508 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ecm1Q61508 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ecm1Q61508 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.25■□□□□ 0.35
Ecm1Q61508 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.25■□□□□ 0.35
Ecm1Q61508 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ecm1Q61508 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ecm1Q61508 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm22065-201ENSMUST00000103753 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm22066-201ENSMUST00000103761 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm24932-201ENSMUST00000103763 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm24115-201ENSMUST00000103799 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm22190-201ENSMUST00000103827 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm22191-201ENSMUST00000103831 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm24721-201ENSMUST00000103849 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm28018-201ENSMUST00000103869 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm26399-201ENSMUST00000103937 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ecm1Q61508 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm25349-201ENSMUST00000177728 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm23616-201ENSMUST00000177797 110 ntBASIC17.24■□□□□ 0.35
Ecm1Q61508 Gm25871-201ENSMUST00000177816 110 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms