Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarf1Q5ND28 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarf1Q5ND28 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarf1Q5ND28 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarf1Q5ND28 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scarf1Q5ND28 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarf1Q5ND28 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 CT009764.1-201ENSMUST00000222260 483 ntBASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarf1Q5ND28 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Gm7222-201ENSMUST00000117512 906 ntBASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Mir5126-201ENSMUST00000175513 77 ntBASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.12■□□□□ 0.33
Scarf1Q5ND28 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Gm25509-201ENSMUST00000116985 106 ntBASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Gm13263-201ENSMUST00000121271 838 ntBASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Gm28745-201ENSMUST00000190069 305 ntBASIC17.11■□□□□ 0.33
Scarf1Q5ND28 AV026068-213ENSMUST00000223675 1171 ntBASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarf1Q5ND28 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarf1Q5ND28 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms