Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Gm18489-201ENSMUST00000172565 551 ntBASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx49Q4FZF3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Gm5177-201ENSMUST00000183092 997 ntBASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Gm45612-201ENSMUST00000211320 160 ntBASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx49Q4FZF3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.17■□□□□ 0.5
Ddx49Q4FZF3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx49Q4FZF3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 Gm11745-201ENSMUST00000121669 448 ntBASIC18.15■□□□□ 0.5
Ddx49Q4FZF3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms