Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Lmo4P61969 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lmo4P61969 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lmo4P61969 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.63□□□□□ -0.39
Lmo4P61969 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Lmo4P61969 Gm8318-201ENSMUST00000182954 872 ntBASIC12.63□□□□□ -0.39
Lmo4P61969 Gm5177-201ENSMUST00000183092 997 ntBASIC12.63□□□□□ -0.39
Lmo4P61969 Gm45747-201ENSMUST00000212203 999 ntBASIC12.63□□□□□ -0.39
Lmo4P61969 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lmo4P61969 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.63□□□□□ -0.39
Lmo4P61969 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.63□□□□□ -0.39
Lmo4P61969 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Lmo4P61969 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmo4P61969 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.62□□□□□ -0.39
Lmo4P61969 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Lmo4P61969 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lmo4P61969 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.62□□□□□ -0.39
Lmo4P61969 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.62□□□□□ -0.39
Lmo4P61969 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lmo4P61969 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Lmo4P61969 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lmo4P61969 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lmo4P61969 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmo4P61969 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.61□□□□□ -0.39
Lmo4P61969 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.61□□□□□ -0.39
Lmo4P61969 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.61□□□□□ -0.39
Lmo4P61969 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 Gm27301-201ENSMUST00000184012 127 ntBASIC12.61□□□□□ -0.39
Lmo4P61969 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.61□□□□□ -0.39
Lmo4P61969 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lmo4P61969 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.61□□□□□ -0.39
Lmo4P61969 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms