Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cks1bP61025 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cks1bP61025 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.2□□□□□ -0.62
Cks1bP61025 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
Cks1bP61025 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Gm24841-201ENSMUST00000158676 357 ntBASIC11.2□□□□□ -0.62
Cks1bP61025 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Cks1bP61025 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cks1bP61025 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.2□□□□□ -0.62
Cks1bP61025 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cks1bP61025 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cks1bP61025 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cks1bP61025 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.19□□□□□ -0.62
Cks1bP61025 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Cks1bP61025 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.19□□□□□ -0.62
Cks1bP61025 Gm18666-201ENSMUST00000190039 958 ntBASIC11.19□□□□□ -0.62
Cks1bP61025 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.19□□□□□ -0.62
Cks1bP61025 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.19□□□□□ -0.62
Cks1bP61025 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cks1bP61025 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Cks1bP61025 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cks1bP61025 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
Cks1bP61025 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.18□□□□□ -0.62
Cks1bP61025 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.18□□□□□ -0.62
Cks1bP61025 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.18□□□□□ -0.62
Cks1bP61025 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.18□□□□□ -0.62
Cks1bP61025 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.18□□□□□ -0.62
Cks1bP61025 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms