Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.95□□□□□ -0.18
Sf3b6P59708 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sf3b6P59708 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sf3b6P59708 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sf3b6P59708 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.95□□□□□ -0.18
Sf3b6P59708 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Sf3b6P59708 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.94□□□□□ -0.18
Sf3b6P59708 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.94□□□□□ -0.18
Sf3b6P59708 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.94□□□□□ -0.18
Sf3b6P59708 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Gm10566-201ENSMUST00000086739 996 ntBASIC13.94□□□□□ -0.18
Sf3b6P59708 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sf3b6P59708 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sf3b6P59708 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.93□□□□□ -0.18
Sf3b6P59708 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Sf3b6P59708 Gm7889-201ENSMUST00000185591 958 ntBASIC13.93□□□□□ -0.18
Sf3b6P59708 Gm18959-201ENSMUST00000208954 655 ntBASIC13.93□□□□□ -0.18
Sf3b6P59708 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sf3b6P59708 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.93□□□□□ -0.18
Sf3b6P59708 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.92□□□□□ -0.18
Sf3b6P59708 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.92□□□□□ -0.18
Sf3b6P59708 Efs-202ENSMUST00000227037 2540 ntBASIC13.92□□□□□ -0.18
Sf3b6P59708 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Gm13474-201ENSMUST00000122466 815 ntBASIC13.92□□□□□ -0.18
Sf3b6P59708 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sf3b6P59708 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.92□□□□□ -0.18
Sf3b6P59708 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Sf3b6P59708 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sf3b6P59708 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms