Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Rph3aP47708 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.12■□□□□ 0.01
Rph3aP47708 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.12■□□□□ 0.01
Rph3aP47708 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Gm9172-201ENSMUST00000212092 954 ntBASIC15.12■□□□□ 0.01
Rph3aP47708 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rph3aP47708 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rph3aP47708 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.12■□□□□ 0.01
Rph3aP47708 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rph3aP47708 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rph3aP47708 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rph3aP47708 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.11■□□□□ 0.01
Rph3aP47708 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rph3aP47708 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rph3aP47708 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rph3aP47708 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.11■□□□□ 0.01
Rph3aP47708 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.11■□□□□ 0.01
Rph3aP47708 Gm6257-201ENSMUST00000163864 910 ntBASIC15.11■□□□□ 0.01
Rph3aP47708 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.11■□□□□ 0.01
Rph3aP47708 Gm28033-201ENSMUST00000184224 96 ntBASIC15.11■□□□□ 0.01
Rph3aP47708 Gm27867-201ENSMUST00000184778 125 ntBASIC15.11■□□□□ 0.01
Rph3aP47708 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.11■□□□□ 0.01
Rph3aP47708 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.11■□□□□ 0.01
Rph3aP47708 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rph3aP47708 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Rph3aP47708 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rph3aP47708 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.1■□□□□ 0.01
Rph3aP47708 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rph3aP47708 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rph3aP47708 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rph3aP47708 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rph3aP47708 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rph3aP47708 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.1■□□□□ 0.01
Rph3aP47708 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.1■□□□□ 0.01
Rph3aP47708 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Rph3aP47708 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.1■□□□□ 0.01
Rph3aP47708 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rph3aP47708 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rph3aP47708 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rph3aP47708 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Rph3aP47708 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms