Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm17808-201ENSMUST00000200859 894 ntBASIC17.6■□□□□ 0.41
Sdc2P43407 Gm45328-201ENSMUST00000210942 917 ntBASIC17.6■□□□□ 0.41
Sdc2P43407 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.6■□□□□ 0.41
Sdc2P43407 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sdc2P43407 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sdc2P43407 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Sdc2P43407 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc2P43407 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdc2P43407 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdc2P43407 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sdc2P43407 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sdc2P43407 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.59■□□□□ 0.41
Sdc2P43407 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc2P43407 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Sdc2P43407 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Sdc2P43407 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Sdc2P43407 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc2P43407 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.58■□□□□ 0.4
Sdc2P43407 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Gm25016-201ENSMUST00000158399 131 ntBASIC17.58■□□□□ 0.4
Sdc2P43407 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Sdc2P43407 Gm29518-201ENSMUST00000190858 372 ntBASIC17.58■□□□□ 0.4
Sdc2P43407 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Sdc2P43407 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.58■□□□□ 0.4
Sdc2P43407 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sdc2P43407 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Sdc2P43407 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sdc2P43407 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.57■□□□□ 0.4
Sdc2P43407 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.57■□□□□ 0.4
Sdc2P43407 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Sdc2P43407 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sdc2P43407 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Sdc2P43407 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.56■□□□□ 0.4
Sdc2P43407 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sdc2P43407 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms