Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.25□□□□□ -0.45
Ccl6P27784 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccl6P27784 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Ccl6P27784 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccl6P27784 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Ccl6P27784 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.25□□□□□ -0.45
Ccl6P27784 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccl6P27784 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl6P27784 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl6P27784 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.24□□□□□ -0.45
Ccl6P27784 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccl6P27784 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccl6P27784 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.24□□□□□ -0.45
Ccl6P27784 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccl6P27784 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl6P27784 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccl6P27784 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl6P27784 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl6P27784 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Ccl6P27784 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccl6P27784 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl6P27784 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl6P27784 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Gm14859-201ENSMUST00000117752 357 ntBASIC12.23□□□□□ -0.45
Ccl6P27784 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl6P27784 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl6P27784 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl6P27784 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl6P27784 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl6P27784 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Ccl6P27784 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl6P27784 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl6P27784 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl6P27784 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccl6P27784 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms