Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Zfp42P22227 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Zfp42P22227 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.5■□□□□ 0.23
Zfp42P22227 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Zfp42P22227 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Zfp42P22227 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.49■□□□□ 0.23
Zfp42P22227 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Gm10013-201ENSMUST00000106074 672 ntBASIC16.49■□□□□ 0.23
Zfp42P22227 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.49■□□□□ 0.23
Zfp42P22227 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Gm18032-201ENSMUST00000222541 538 ntBASIC16.49■□□□□ 0.23
Zfp42P22227 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Zfp42P22227 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Zfp42P22227 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Zfp42P22227 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Zfp42P22227 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.48■□□□□ 0.23
Zfp42P22227 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Zfp42P22227 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.48■□□□□ 0.23
Zfp42P22227 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Zfp42P22227 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Zfp42P22227 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.48■□□□□ 0.23
Zfp42P22227 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Zfp42P22227 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Zfp42P22227 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Zfp42P22227 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Zfp42P22227 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Zfp42P22227 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.47■□□□□ 0.23
Zfp42P22227 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.47■□□□□ 0.23
Zfp42P22227 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.47■□□□□ 0.23
Zfp42P22227 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.47■□□□□ 0.23
Zfp42P22227 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Zfp42P22227 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Zfp42P22227 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Zfp42P22227 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.46■□□□□ 0.23
Zfp42P22227 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Zfp42P22227 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Mir770-201ENSMUST00000103252 94 ntBASIC16.46■□□□□ 0.23
Zfp42P22227 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Zfp42P22227 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Zfp42P22227 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms