Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.84□□□□□ -0.51
P01739 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Gm29518-201ENSMUST00000190858 372 ntBASIC11.84□□□□□ -0.51
P01739 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.84□□□□□ -0.51
P01739 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P01739 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
P01739 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P01739 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
P01739 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P01739 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
P01739 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 AA414768-201ENSMUST00000121924 1257 ntBASIC11.83□□□□□ -0.52
P01739 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.83□□□□□ -0.52
P01739 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.83□□□□□ -0.52
P01739 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
P01739 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
P01739 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P01739 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
P01739 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P01739 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P01739 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P01739 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.83□□□□□ -0.52
P01739 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P01739 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.82□□□□□ -0.52
P01739 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.82□□□□□ -0.52
P01739 Gm6257-201ENSMUST00000163864 910 ntBASIC11.82□□□□□ -0.52
P01739 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.82□□□□□ -0.52
P01739 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.82□□□□□ -0.52
P01739 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
P01739 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
P01739 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P01739 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P01739 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.81□□□□□ -0.52
P01739 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
P01739 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01739 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
P01739 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P01739 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P01739 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
P01739 Gm6659-201ENSMUST00000174752 547 ntBASIC11.81□□□□□ -0.52
P01739 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms