Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vti1aO89116 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Vti1aO89116 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Vti1aO89116 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.87■□□□□ 0.29
Vti1aO89116 Gm14494-201ENSMUST00000118786 435 ntBASIC16.87■□□□□ 0.29
Vti1aO89116 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vti1aO89116 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.87■□□□□ 0.29
Vti1aO89116 Gm43575-201ENSMUST00000196420 516 ntBASIC16.87■□□□□ 0.29
Vti1aO89116 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.87■□□□□ 0.29
Vti1aO89116 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.87■□□□□ 0.29
Vti1aO89116 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.87■□□□□ 0.29
Vti1aO89116 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Vti1aO89116 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vti1aO89116 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Vti1aO89116 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vti1aO89116 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.86■□□□□ 0.29
Vti1aO89116 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vti1aO89116 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.86■□□□□ 0.29
Vti1aO89116 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Vti1aO89116 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Vti1aO89116 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vti1aO89116 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vti1aO89116 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vti1aO89116 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.85■□□□□ 0.29
Vti1aO89116 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.85■□□□□ 0.29
Vti1aO89116 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vti1aO89116 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.85■□□□□ 0.29
Vti1aO89116 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Vti1aO89116 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.85■□□□□ 0.29
Vti1aO89116 Gm2756-201ENSMUST00000195851 400 ntBASIC16.85■□□□□ 0.29
Vti1aO89116 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.85■□□□□ 0.29
Vti1aO89116 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.85■□□□□ 0.29
Vti1aO89116 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Vti1aO89116 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.85■□□□□ 0.29
Vti1aO89116 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vti1aO89116 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Vti1aO89116 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vti1aO89116 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms