Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.18□□□□□ -0.14
Abcd4O89016 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Abcd4O89016 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Abcd4O89016 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.18□□□□□ -0.14
Abcd4O89016 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Abcd4O89016 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Abcd4O89016 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Abcd4O89016 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Abcd4O89016 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Abcd4O89016 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.17□□□□□ -0.14
Abcd4O89016 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.17□□□□□ -0.14
Abcd4O89016 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Abcd4O89016 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.17□□□□□ -0.14
Abcd4O89016 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.17□□□□□ -0.14
Abcd4O89016 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Abcd4O89016 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.17□□□□□ -0.14
Abcd4O89016 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.17□□□□□ -0.14
Abcd4O89016 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Abcd4O89016 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Abcd4O89016 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Abcd4O89016 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.16□□□□□ -0.14
Abcd4O89016 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.16□□□□□ -0.14
Abcd4O89016 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Abcd4O89016 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.16□□□□□ -0.14
Abcd4O89016 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Abcd4O89016 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Abcd4O89016 Gm25990-201ENSMUST00000102440 86 ntBASIC14.16□□□□□ -0.14
Abcd4O89016 Gm15173-201ENSMUST00000122049 433 ntBASIC14.16□□□□□ -0.14
Abcd4O89016 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.16□□□□□ -0.14
Abcd4O89016 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.16□□□□□ -0.14
Abcd4O89016 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.16□□□□□ -0.14
Abcd4O89016 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.16□□□□□ -0.14
Abcd4O89016 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.16□□□□□ -0.14
Abcd4O89016 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Abcd4O89016 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Abcd4O89016 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Abcd4O89016 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Abcd4O89016 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Abcd4O89016 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Abcd4O89016 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Abcd4O89016 Gm8097-201ENSMUST00000117903 829 ntBASIC14.15□□□□□ -0.14
Abcd4O89016 Gm4459-201ENSMUST00000118750 468 ntBASIC14.15□□□□□ -0.14
Abcd4O89016 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.15□□□□□ -0.14
Abcd4O89016 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.15□□□□□ -0.14
Abcd4O89016 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms