Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Best1O88870 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Best1O88870 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Best1O88870 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.03■□□□□ -0
Best1O88870 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.03■□□□□ -0
Best1O88870 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.03■□□□□ -0
Best1O88870 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.03■□□□□ -0
Best1O88870 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.03■□□□□ -0
Best1O88870 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.03■□□□□ -0
Best1O88870 Gm37935-201ENSMUST00000192012 982 ntBASIC15.03■□□□□ -0
Best1O88870 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.03■□□□□ -0
Best1O88870 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.03■□□□□ -0
Best1O88870 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.03■□□□□ -0
Best1O88870 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Best1O88870 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Best1O88870 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Best1O88870 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.02■□□□□ -0
Best1O88870 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
Best1O88870 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.02■□□□□ -0
Best1O88870 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.02■□□□□ -0
Best1O88870 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.02■□□□□ -0
Best1O88870 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Best1O88870 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Best1O88870 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.02□□□□□ -0.01
Best1O88870 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Best1O88870 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.02□□□□□ -0.01
Best1O88870 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Best1O88870 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Best1O88870 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Best1O88870 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Best1O88870 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Best1O88870 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.01□□□□□ -0.01
Best1O88870 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.01□□□□□ -0.01
Best1O88870 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Best1O88870 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Best1O88870 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.01□□□□□ -0.01
Best1O88870 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Best1O88870 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.01□□□□□ -0.01
Best1O88870 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Best1O88870 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Best1O88870 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Best1O88870 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Best1O88870 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.01□□□□□ -0.01
Best1O88870 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Best1O88870 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Best1O88870 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms