Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.03■□□□□ -0
Hcn1O88704 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.03■□□□□ -0
Hcn1O88704 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.03■□□□□ -0
Hcn1O88704 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.03■□□□□ -0
Hcn1O88704 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.03■□□□□ -0
Hcn1O88704 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Hcn1O88704 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 App-207ENSMUST00000227737 2827 ntBASIC15.03■□□□□ -0
Hcn1O88704 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Hcn1O88704 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Hcn1O88704 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hcn1O88704 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Hcn1O88704 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hcn1O88704 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Hcn1O88704 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hcn1O88704 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.02■□□□□ -0
Hcn1O88704 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.02■□□□□ -0
Hcn1O88704 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.02■□□□□ -0
Hcn1O88704 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.02■□□□□ -0
Hcn1O88704 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hcn1O88704 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn1O88704 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn1O88704 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn1O88704 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn1O88704 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hcn1O88704 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Hcn1O88704 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.01□□□□□ -0.01
Hcn1O88704 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.01□□□□□ -0.01
Hcn1O88704 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.01□□□□□ -0.01
Hcn1O88704 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Hcn1O88704 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hcn1O88704 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hcn1O88704 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hcn1O88704 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Hcn1O88704 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hcn1O88704 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15□□□□□ -0.01
Hcn1O88704 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15□□□□□ -0.01
Hcn1O88704 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms