Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ubr1O70481 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.15■□□□□ 0.82
Ubr1O70481 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.15■□□□□ 0.82
Ubr1O70481 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr1O70481 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr1O70481 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr1O70481 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr1O70481 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ubr1O70481 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.14■□□□□ 0.81
Ubr1O70481 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.14■□□□□ 0.81
Ubr1O70481 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.14■□□□□ 0.81
Ubr1O70481 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.14■□□□□ 0.81
Ubr1O70481 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.14■□□□□ 0.81
Ubr1O70481 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.14■□□□□ 0.81
Ubr1O70481 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ubr1O70481 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr1O70481 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
Ubr1O70481 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr1O70481 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr1O70481 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr1O70481 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ubr1O70481 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ubr1O70481 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC20.13■□□□□ 0.81
Ubr1O70481 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ubr1O70481 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.13■□□□□ 0.81
Ubr1O70481 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ubr1O70481 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.13■□□□□ 0.81
Ubr1O70481 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ubr1O70481 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Ubr1O70481 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ubr1O70481 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ubr1O70481 Gm27920-201ENSMUST00000183953 96 ntBASIC20.12■□□□□ 0.81
Ubr1O70481 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.12■□□□□ 0.81
Ubr1O70481 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ubr1O70481 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC20.12■□□□□ 0.81
Ubr1O70481 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.12■□□□□ 0.81
Ubr1O70481 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ubr1O70481 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ubr1O70481 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr1O70481 Gm16026-204ENSMUST00000162652 683 ntBASIC20.11■□□□□ 0.81
Ubr1O70481 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.11■□□□□ 0.81
Ubr1O70481 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr1O70481 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr1O70481 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.11■□□□□ 0.81
Ubr1O70481 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC20.11■□□□□ 0.81
Ubr1O70481 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.11■□□□□ 0.81
Ubr1O70481 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.11■□□□□ 0.81
Ubr1O70481 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ubr1O70481 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ubr1O70481 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ubr1O70481 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Gm5779-201ENSMUST00000218467 910 ntBASIC20.1■□□□□ 0.81
Ubr1O70481 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.1■□□□□ 0.81
Ubr1O70481 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ubr1O70481 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ubr1O70481 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ubr1O70481 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ubr1O70481 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ubr1O70481 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr1O70481 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms