Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
IsxA1A546 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
IsxA1A546 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
IsxA1A546 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.61□□□□□ -0.07
IsxA1A546 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
IsxA1A546 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.61□□□□□ -0.07
IsxA1A546 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IsxA1A546 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.61□□□□□ -0.07
IsxA1A546 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IsxA1A546 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IsxA1A546 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.61□□□□□ -0.07
IsxA1A546 Gm37292-201ENSMUST00000192062 758 ntBASIC14.61□□□□□ -0.07
IsxA1A546 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
IsxA1A546 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IsxA1A546 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IsxA1A546 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Mir1199-201ENSMUST00000117015 119 ntBASIC14.6□□□□□ -0.07
IsxA1A546 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.6□□□□□ -0.07
IsxA1A546 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.6□□□□□ -0.07
IsxA1A546 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IsxA1A546 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.6□□□□□ -0.07
IsxA1A546 Gm9731-201ENSMUST00000209480 747 ntBASIC14.6□□□□□ -0.07
IsxA1A546 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
IsxA1A546 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.6□□□□□ -0.07
IsxA1A546 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
IsxA1A546 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
IsxA1A546 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IsxA1A546 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
IsxA1A546 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.6□□□□□ -0.07
IsxA1A546 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.6□□□□□ -0.07
IsxA1A546 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.6□□□□□ -0.07
IsxA1A546 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.6□□□□□ -0.07
IsxA1A546 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.6□□□□□ -0.07
IsxA1A546 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IsxA1A546 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
IsxA1A546 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Gm715-201ENSMUST00000117865 831 ntBASIC14.59□□□□□ -0.07
IsxA1A546 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IsxA1A546 Gm36967-201ENSMUST00000193814 266 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms