Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm26039-201ENSMUST00000158152 144 ntBASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm32996-201ENSMUST00000199828 1447 ntBASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.81□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm13436-201ENSMUST00000120418 567 ntBASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.8□□□□□ -0.68
Trav13d-4A0A0G2JFX3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms