Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv3A0A0A6YYE2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trbv3A0A0A6YYE2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm11539-201ENSMUST00000119837 557 ntBASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv3A0A0A6YYE2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv3A0A0A6YYE2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms