Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-3A0A075B6A4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-3A0A075B6A4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm9731-201ENSMUST00000209480 747 ntBASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav12d-3A0A075B6A4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav12d-3A0A075B6A4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms