Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.71
Trav3-4A0A075B654 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-4A0A075B654 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Gm6576-201ENSMUST00000169678 883 ntBASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Gm13241-201ENSMUST00000094493 780 ntBASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms