Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Mir5133-201ENSMUST00000174955 77 ntBASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Gm42569-201ENSMUST00000200539 472 ntBASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 BC037039-201ENSMUST00000192003 2205 ntBASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav8-1A0A075B641 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav8-1A0A075B641 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Gm15375-201ENSMUST00000119510 849 ntBASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Gm5408-201ENSMUST00000197998 747 ntBASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Gm4968-201ENSMUST00000071458 858 ntBASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trav8-1A0A075B641 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms