Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Gm12896-201ENSMUST00000118430 226 ntBASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ap3s1Q9DCR2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.02□□□□□ -0.16
Ap3s1Q9DCR2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ap3s1Q9DCR2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ap3s1Q9DCR2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ap3s1Q9DCR2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Gm13186-201ENSMUST00000118031 316 ntBASIC14□□□□□ -0.17
Ap3s1Q9DCR2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms