Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdc40Q9DC48 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.57□□□□□ -0.08
Cdc40Q9DC48 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdc40Q9DC48 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Cdc40Q9DC48 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms