Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.61□□□□□ -0.23
Mbd3l1Q9D9H3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gm42778-201ENSMUST00000199644 553 ntBASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gm15820-201ENSMUST00000201566 728 ntBASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Mbd3l1Q9D9H3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Mir6349-201ENSMUST00000184059 97 ntBASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Mbd3l1Q9D9H3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mbd3l1Q9D9H3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mbd3l1Q9D9H3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mbd3l1Q9D9H3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mbd3l1Q9D9H3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.58□□□□□ -0.23
Mbd3l1Q9D9H3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Mbd3l1Q9D9H3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Gm27000-201ENSMUST00000182943 842 ntBASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Gm43173-201ENSMUST00000202246 593 ntBASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Mbd3l1Q9D9H3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms