Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nip7Q9CXK8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.48■□□□□ 0.71
Nip7Q9CXK8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Gm20553-201ENSMUST00000204205 844 ntBASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nip7Q9CXK8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Nip7Q9CXK8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 AA543401-201ENSMUST00000164248 1269 ntBASIC19.46■□□□□ 0.71
Nip7Q9CXK8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nip7Q9CXK8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nip7Q9CXK8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Mir6990-201ENSMUST00000183724 91 ntBASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nip7Q9CXK8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nip7Q9CXK8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms