Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 App-207ENSMUST00000227737 2827 ntBASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tlr3Q99MB1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tlr3Q99MB1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.83■□□□□ 0.28
Tlr3Q99MB1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tlr3Q99MB1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Gm12644-201ENSMUST00000119935 606 ntBASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Gm12497-201ENSMUST00000138778 237 ntBASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tlr3Q99MB1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.81■□□□□ 0.28
Tlr3Q99MB1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms