Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.5■□□□□ 0.55
Col20a1Q923P0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col20a1Q923P0 Gm4995-201ENSMUST00000117247 432 ntBASIC18.49■□□□□ 0.55
Col20a1Q923P0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Gm27702-201ENSMUST00000184512 56 ntBASIC18.49■□□□□ 0.55
Col20a1Q923P0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.49■□□□□ 0.55
Col20a1Q923P0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Col20a1Q923P0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.48■□□□□ 0.55
Col20a1Q923P0 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.48■□□□□ 0.55
Col20a1Q923P0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Col20a1Q923P0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Gm14722-201ENSMUST00000118943 689 ntBASIC18.48■□□□□ 0.55
Col20a1Q923P0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Col20a1Q923P0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.48■□□□□ 0.55
Col20a1Q923P0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Col20a1Q923P0 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.48■□□□□ 0.55
Col20a1Q923P0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col20a1Q923P0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.47■□□□□ 0.55
Col20a1Q923P0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col20a1Q923P0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms